REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0054AL215_1_4 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0054  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 2nac_A 
ATOM      1  N   VAL   186      18.781  28.043  56.499  1.00  0.00              
ATOM      2  CA  VAL   186      19.300  28.781  57.679  1.00  0.00              
ATOM      3  C   VAL   186      18.700  30.160  57.675  1.00  0.00              
ATOM      4  O   VAL   186      18.444  30.832  56.705  1.00  0.00              
ATOM      5  N   LEU   187      18.391  30.527  58.922  1.00  0.00              
ATOM      6  CA  LEU   187      17.693  31.706  59.273  1.00  0.00              
ATOM      7  C   LEU   187      18.259  32.461  60.512  1.00  0.00              
ATOM      8  O   LEU   187      18.991  31.896  61.276  1.00  0.00              
ATOM      9  N   ARG   188      17.812  33.720  60.522  1.00  0.00              
ATOM     10  CA  ARG   188      18.128  34.599  61.636  1.00  0.00              
ATOM     11  C   ARG   188      16.848  35.311  62.093  1.00  0.00              
ATOM     12  O   ARG   188      16.269  36.135  61.441  1.00  0.00              
ATOM     13  N   ASP   189      16.439  34.988  63.315  1.00  0.00              
ATOM     14  CA  ASP   189      17.058  34.007  64.203  1.00  0.00              
ATOM     15  C   ASP   189      16.520  32.609  63.996  1.00  0.00              
ATOM     16  O   ASP   189      15.654  32.451  63.143  1.00  0.00              
ATOM     17  N   GLU   190      16.940  31.630  64.756  1.00  0.00              
ATOM     18  CA  GLU   190      16.382  30.295  64.689  1.00  0.00              
ATOM     19  C   GLU   190      15.909  29.845  66.050  1.00  0.00              
ATOM     20  O   GLU   190      16.633  30.025  67.038  1.00  0.00              
ATOM     21  N   PRO   191      14.773  29.246  66.213  1.00  0.00              
ATOM     22  CA  PRO   191      13.810  28.989  65.142  1.00  0.00              
ATOM     23  C   PRO   191      13.292  30.308  64.651  1.00  0.00              
ATOM     24  O   PRO   191      13.240  31.341  65.341  1.00  0.00              
ATOM     25  N   TYR   192      12.930  30.354  63.361  1.00  0.00              
ATOM     26  CA  TYR   192      12.439  31.592  62.772  1.00  0.00              
ATOM     27  C   TYR   192      11.070  31.873  63.336  1.00  0.00              
ATOM     28  O   TYR   192      10.210  31.006  63.429  1.00  0.00              
ATOM     29  N   PRO   193      10.811  33.110  63.718  1.00  0.00              
ATOM     30  CA  PRO   193       9.537  33.579  64.192  1.00  0.00              
ATOM     31  C   PRO   193       8.525  33.260  63.077  1.00  0.00              
ATOM     32  O   PRO   193       8.805  33.180  61.873  1.00  0.00              
ATOM     33  N   ASN   194       7.303  33.058  63.483  1.00  0.00              
ATOM     34  CA  ASN   194       6.216  32.683  62.566  1.00  0.00              
ATOM     35  C   ASN   194       5.987  33.719  61.499  1.00  0.00              
ATOM     36  O   ASN   194       5.562  33.377  60.406  1.00  0.00              
ATOM     37  N   SER   195       6.250  34.973  61.720  1.00  0.00              
ATOM     38  CA  SER   195       6.109  36.072  60.805  1.00  0.00              
ATOM     39  C   SER   195       7.416  36.431  60.109  1.00  0.00              
ATOM     40  O   SER   195       7.524  37.513  59.499  1.00  0.00              
ATOM     41  N   TYR   196       8.435  35.572  60.159  1.00  0.00              
ATOM     42  CA  TYR   196       9.692  35.952  59.491  1.00  0.00              
ATOM     43  C   TYR   196       9.380  36.123  58.008  1.00  0.00              
ATOM     44  O   TYR   196       8.761  35.243  57.420  1.00  0.00              
END
