REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0054AL215_1_2 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0054  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 2nac_A 
ATOM      1  N   ALA    57      27.580  20.067  40.279  1.00  0.00              
ATOM      2  CA  ALA    57      27.059  20.916  39.237  1.00  0.00              
ATOM      3  C   ALA    57      27.765  20.764  37.914  1.00  0.00              
ATOM      4  O   ALA    57      27.214  21.110  36.881  1.00  0.00              
ATOM      5  N   ALA    58      29.000  20.288  37.888  1.00  0.00              
ATOM      6  CA  ALA    58      29.753  20.217  36.665  1.00  0.00              
ATOM      7  C   ALA    58      29.065  19.576  35.451  1.00  0.00              
ATOM      8  O   ALA    58      29.098  20.157  34.381  1.00  0.00              
ATOM      9  N   THR    59      28.536  18.419  35.633  1.00  0.00              
ATOM     10  CA  THR    59      27.849  17.728  34.495  1.00  0.00              
ATOM     11  C   THR    59      26.564  18.417  34.023  1.00  0.00              
ATOM     12  O   THR    59      25.967  18.003  33.028  1.00  0.00              
ATOM     13  N   GLN    60      26.093  19.436  34.700  1.00  0.00              
ATOM     14  CA  GLN    60      24.943  20.223  34.311  1.00  0.00              
ATOM     15  C   GLN    60      25.385  21.242  33.259  1.00  0.00              
ATOM     16  O   GLN    60      24.627  22.053  32.749  1.00  0.00              
ATOM     17  N   GLY    61      26.658  21.301  32.926  1.00  0.00              
ATOM     18  CA  GLY    61      27.270  22.153  31.973  1.00  0.00              
ATOM     19  C   GLY    61      27.178  23.629  32.220  1.00  0.00              
ATOM     20  O   GLY    61      27.103  24.519  31.372  1.00  0.00              
ATOM     21  N   TYR    62      27.225  23.965  33.522  1.00  0.00              
ATOM     22  CA  TYR    62      27.272  25.322  34.025  1.00  0.00              
ATOM     23  C   TYR    62      28.737  25.784  33.974  1.00  0.00              
ATOM     24  O   TYR    62      29.658  24.955  33.890  1.00  0.00              
ATOM     25  N   GLY    63      28.968  27.051  34.012  1.00  0.00              
ATOM     26  CA  GLY    63      30.289  27.694  34.080  1.00  0.00              
ATOM     27  C   GLY    63      30.540  27.953  35.593  1.00  0.00              
ATOM     28  O   GLY    63      29.766  28.684  36.202  1.00  0.00              
ATOM     29  N   LEU    64      31.590  27.319  36.138  1.00  0.00              
ATOM     30  CA  LEU    64      31.871  27.415  37.593  1.00  0.00              
ATOM     31  C   LEU    64      32.873  28.476  38.008  1.00  0.00              
ATOM     32  O   LEU    64      33.891  28.623  37.350  1.00  0.00              
ATOM     33  N   LEU    65      32.496  29.194  39.039  1.00  0.00              
ATOM     34  CA  LEU    65      33.248  30.261  39.613  1.00  0.00              
ATOM     35  C   LEU    65      33.364  30.046  41.119  1.00  0.00              
ATOM     36  O   LEU    65      32.533  29.463  41.769  1.00  0.00              
ATOM     37  N   LEU    66      34.456  30.585  41.710  1.00  0.00              
ATOM     38  CA  LEU    66      34.611  30.467  43.156  1.00  0.00              
ATOM     39  C   LEU    66      35.570  31.579  43.641  1.00  0.00              
ATOM     40  O   LEU    66      36.310  32.181  42.891  1.00  0.00              
ATOM     41  N   TRP    67      35.410  31.802  44.940  1.00  0.00              
ATOM     42  CA  TRP    67      36.275  32.726  45.638  1.00  0.00              
ATOM     43  C   TRP    67      36.432  32.031  46.992  1.00  0.00              
ATOM     44  O   TRP    67      35.601  31.276  47.480  1.00  0.00              
ATOM     45  N   ASP    68      37.555  32.285  47.667  1.00  0.00              
ATOM     46  CA  ASP    68      37.801  31.706  49.003  1.00  0.00              
ATOM     47  C   ASP    68      39.028  32.465  49.620  1.00  0.00              
ATOM     48  O   ASP    68      39.656  33.267  48.919  1.00  0.00              
ATOM     49  N   GLY    69      39.383  32.135  50.838  1.00  0.00              
ATOM     50  CA  GLY    69      40.517  32.788  51.505  1.00  0.00              
ATOM     51  C   GLY    69      41.757  32.376  50.739  1.00  0.00              
ATOM     52  O   GLY    69      42.627  33.236  50.569  1.00  0.00              
ATOM     53  N   TYR    70      41.819  31.130  50.299  1.00  0.00              
ATOM     54  CA  TYR    70      42.922  30.624  49.517  1.00  0.00              
ATOM     55  C   TYR    70      42.434  29.902  48.265  1.00  0.00              
ATOM     56  O   TYR    70      41.398  29.280  48.303  1.00  0.00              
ATOM     57  N   ARG    71      43.261  29.911  47.277  1.00  0.00              
ATOM     58  CA  ARG    71      42.960  29.247  46.046  1.00  0.00              
ATOM     59  C   ARG    71      43.036  27.769  46.117  1.00  0.00              
ATOM     60  O   ARG    71      43.732  27.225  46.972  1.00  0.00              
ATOM     61  N   PRO    72      42.303  27.002  45.348  1.00  0.00              
ATOM     62  CA  PRO    72      42.384  25.547  45.410  1.00  0.00              
ATOM     63  C   PRO    72      43.625  25.199  44.549  1.00  0.00              
ATOM     64  O   PRO    72      44.105  26.025  43.766  1.00  0.00              
ATOM     65  N   LYS    73      44.083  23.976  44.685  1.00  0.00              
ATOM     66  CA  LYS    73      45.215  23.475  43.917  1.00  0.00              
ATOM     67  C   LYS    73      44.851  23.610  42.457  1.00  0.00              
ATOM     68  O   LYS    73      43.698  23.335  42.047  1.00  0.00              
ATOM     69  N   ARG    74      45.820  23.925  41.633  1.00  0.00              
ATOM     70  CA  ARG    74      45.557  24.075  40.192  1.00  0.00              
ATOM     71  C   ARG    74      44.946  22.867  39.533  1.00  0.00              
ATOM     72  O   ARG    74      44.157  23.029  38.600  1.00  0.00              
ATOM     73  N   ALA    75      45.196  21.643  39.942  1.00  0.00              
ATOM     74  CA  ALA    75      44.673  20.414  39.450  1.00  0.00              
ATOM     75  C   ALA    75      43.139  20.321  39.607  1.00  0.00              
ATOM     76  O   ALA    75      42.470  19.729  38.766  1.00  0.00              
ATOM     77  N   VAL    76      42.657  20.797  40.750  1.00  0.00              
ATOM     78  CA  VAL    76      41.240  20.797  41.052  1.00  0.00              
ATOM     79  C   VAL    76      40.636  21.896  40.174  1.00  0.00              
ATOM     80  O   VAL    76      39.641  21.669  39.523  1.00  0.00              
ATOM     81  N   ASN    77      41.276  23.047  40.121  1.00  0.00              
ATOM     82  CA  ASN    77      40.825  24.120  39.273  1.00  0.00              
ATOM     83  C   ASN    77      40.749  23.628  37.847  1.00  0.00              
ATOM     84  O   ASN    77      39.778  23.862  37.093  1.00  0.00              
ATOM     85  N   CYS    78      41.702  22.888  37.357  1.00  0.00              
ATOM     86  CA  CYS    78      41.678  22.418  35.988  1.00  0.00              
ATOM     87  C   CYS    78      40.662  21.314  35.780  1.00  0.00              
ATOM     88  O   CYS    78      40.063  21.245  34.717  1.00  0.00              
ATOM     89  N   PHE    79      40.460  20.470  36.780  1.00  0.00              
ATOM     90  CA  PHE    79      39.500  19.399  36.565  1.00  0.00              
ATOM     91  C   PHE    79      38.056  19.905  36.529  1.00  0.00              
ATOM     92  O   PHE    79      37.299  19.324  35.735  1.00  0.00              
ATOM     93  N   MET    80      37.677  20.926  37.222  1.00  0.00              
ATOM     94  CA  MET    80      36.316  21.429  37.218  1.00  0.00              
ATOM     95  C   MET    80      36.148  22.647  36.367  1.00  0.00              
ATOM     96  O   MET    80      35.150  23.345  36.255  1.00  0.00              
ATOM     97  N   GLN    81      37.245  23.021  35.728  1.00  0.00              
ATOM     98  CA  GLN    81      37.249  24.192  34.886  1.00  0.00              
ATOM     99  C   GLN    81      36.764  25.406  35.647  1.00  0.00              
ATOM    100  O   GLN    81      35.952  26.211  35.191  1.00  0.00              
ATOM    101  N   TRP    82      37.381  25.623  36.819  1.00  0.00              
ATOM    102  CA  TRP    82      36.998  26.717  37.667  1.00  0.00              
ATOM    103  C   TRP    82      37.568  28.058  37.343  1.00  0.00              
ATOM    104  O   TRP    82      38.688  28.114  36.887  1.00  0.00              
ATOM    105  N   ALA    83      36.828  29.099  37.544  1.00  0.00              
ATOM    106  CA  ALA    83      37.272  30.453  37.380  1.00  0.00              
ATOM    107  C   ALA    83      37.392  30.984  38.794  1.00  0.00              
ATOM    108  O   ALA    83      36.477  31.030  39.573  1.00  0.00              
ATOM    109  N   ALA    84      38.614  31.420  39.119  1.00  0.00              
ATOM    110  CA  ALA    84      38.910  31.975  40.418  1.00  0.00              
ATOM    111  C   ALA    84      38.634  33.445  40.443  1.00  0.00              
ATOM    112  O   ALA    84      38.940  34.156  39.483  1.00  0.00              
ATOM    113  N   GLN    85      38.078  34.040  41.477  1.00  0.00              
ATOM    114  CA  GLN    85      37.832  35.407  41.759  1.00  0.00              
ATOM    115  C   GLN    85      38.498  35.630  43.145  1.00  0.00              
ATOM    116  O   GLN    85      38.315  34.909  44.111  1.00  0.00              
ATOM    117  N   PRO    86      39.269  36.708  43.131  1.00  0.00              
ATOM    118  CA  PRO    86      40.014  36.983  44.400  1.00  0.00              
ATOM    119  C   PRO    86      39.174  37.566  45.493  1.00  0.00              
ATOM    120  O   PRO    86      39.424  37.415  46.692  1.00  0.00              
ATOM    121  N   GLU    87      38.067  38.213  45.085  1.00  0.00              
ATOM    122  CA  GLU    87      37.126  38.800  45.981  1.00  0.00              
ATOM    123  C   GLU    87      35.686  38.386  45.555  1.00  0.00              
ATOM    124  O   GLU    87      35.454  38.072  44.411  1.00  0.00              
END
