REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0051AL277_2_2 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : DEERFIELD 
REMARK  ---------------------------------------------------------- 
TARGET T0051  
AUTHOR 8120-3487-1357  
REMARK Matrix Used: BS_30_25%   
REMARK Alignment Method Used: Quasi-Global Dynamic Programming  
METHOD Sequence-Structure alignment based on the environments  
METHOD published in: Deerfield, Holland-Minkley, Geigel, and   
METHOD Nicholas 1997. "Classification of the Environment of   
METHOD Protein Residues" J. Prot. Chem. 16:441-446.  
METHOD   
METHOD This test uses our latest (unpublished) environment   
METHOD classifications and extentions.  
MODEL  2  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1ctd_B 
ATOM      1  N   LYS   133      -0.013 -11.146  13.420  1.00  0.00              
ATOM      2  CA  LYS   133       0.737 -10.613  12.257  1.00  0.00              
ATOM      3  C   LYS   133       1.919 -11.498  11.836  1.00  0.00              
ATOM      4  O   LYS   133       2.741 -11.925  12.641  1.00  0.00              
ATOM      5  N   GLY   134       1.863 -11.845  10.552  1.00  0.00              
ATOM      6  CA  GLY   134       2.863 -12.693   9.859  1.00  0.00              
ATOM      7  C   GLY   134       2.804 -12.395   8.359  1.00  0.00              
ATOM      8  O   GLY   134       1.813 -11.874   7.869  1.00  0.00              
ATOM      9  N   CYS   135       3.874 -12.775   7.649  1.00  0.00              
ATOM     10  CA  CYS   135       3.910 -12.743   6.159  1.00  0.00              
ATOM     11  C   CYS   135       2.684 -13.431   5.529  1.00  0.00              
ATOM     12  O   CYS   135       1.989 -12.831   4.716  1.00  0.00              
ATOM     13  N   ARG   136       2.336 -14.595   6.084  1.00  0.00              
ATOM     14  CA  ARG   136       1.148 -15.387   5.720  1.00  0.00              
ATOM     15  C   ARG   136      -0.165 -14.603   5.896  1.00  0.00              
ATOM     16  O   ARG   136      -0.955 -14.478   4.957  1.00  0.00              
ATOM     17  N   LYS   137      -0.348 -14.008   7.078  1.00  0.00              
ATOM     18  CA  LYS   137      -1.506 -13.134   7.370  1.00  0.00              
ATOM     19  C   LYS   137      -1.574 -11.884   6.465  1.00  0.00              
ATOM     20  O   LYS   137      -2.638 -11.525   5.980  1.00  0.00              
ATOM     21  N   VAL   138      -0.414 -11.267   6.247  1.00  0.00              
ATOM     22  CA  VAL   138      -0.267 -10.082   5.387  1.00  0.00              
ATOM     23  C   VAL   138      -0.567 -10.350   3.904  1.00  0.00              
ATOM     24  O   VAL   138      -1.108  -9.480   3.230  1.00  0.00              
ATOM     25  N   LEU   139      -0.258 -11.550   3.417  1.00  0.00              
ATOM     26  CA  LEU   139      -0.629 -12.034   2.080  1.00  0.00              
ATOM     27  C   LEU   139      -2.139 -11.850   1.788  1.00  0.00              
ATOM     28  O   LEU   139      -2.509 -11.207   0.813  1.00  0.00              
ATOM     29  N   GLU   140      -2.972 -12.247   2.752  1.00  0.00              
ATOM     30  CA  GLU   140      -4.412 -11.982   2.736  1.00  0.00              
ATOM     31  C   GLU   140      -4.787 -10.501   2.715  1.00  0.00              
ATOM     32  O   GLU   140      -5.517 -10.059   1.836  1.00  0.00              
ATOM     33  N   ALA   141      -4.190  -9.727   3.632  1.00  0.00              
ATOM     34  CA  ALA   141      -4.357  -8.260   3.659  1.00  0.00              
ATOM     35  C   ALA   141      -4.064  -7.527   2.351  1.00  0.00              
ATOM     36  O   ALA   141      -4.926  -6.849   1.812  1.00  0.00              
ATOM     37  N   VAL   142      -2.991  -7.994   1.722  1.00  0.00              
ATOM     38  CA  VAL   142      -2.530  -7.570   0.391  1.00  0.00              
ATOM     39  C   VAL   142      -3.606  -7.771  -0.677  1.00  0.00              
ATOM     40  O   VAL   142      -4.101  -6.820  -1.263  1.00  0.00              
ATOM     41  N   ASN   143      -4.151  -8.970  -0.615  1.00  0.00              
ATOM     42  CA  ASN   143      -5.222  -9.440  -1.503  1.00  0.00              
ATOM     43  C   ASN   143      -6.541  -8.683  -1.376  1.00  0.00              
ATOM     44  O   ASN   143      -7.055  -8.168  -2.367  1.00  0.00              
ATOM     45  N   LEU   144      -6.834  -8.357  -0.120  1.00  0.00              
ATOM     46  CA  LEU   144      -8.010  -7.569   0.262  1.00  0.00              
ATOM     47  C   LEU   144      -8.006  -6.140  -0.344  1.00  0.00              
ATOM     48  O   LEU   144      -8.999  -5.635  -0.852  1.00  0.00              
ATOM     49  N   PRO   145      -6.814  -5.576  -0.291  1.00  0.00              
ATOM     50  CA  PRO   145      -6.465  -4.229  -0.782  1.00  0.00              
ATOM     51  C   PRO   145      -6.284  -4.124  -2.312  1.00  0.00              
ATOM     52  O   PRO   145      -6.582  -3.104  -2.916  1.00  0.00              
ATOM     53  N   LEU   146      -5.679  -5.169  -2.873  1.00  0.00              
ATOM     54  CA  LEU   146      -5.371  -5.367  -4.300  1.00  0.00              
ATOM     55  C   LEU   146      -6.642  -5.733  -5.104  1.00  0.00              
ATOM     56  O   LEU   146      -6.701  -6.706  -5.843  1.00  0.00              
ATOM     57  N   GLN   147      -7.568  -4.791  -5.018  1.00  0.00              
ATOM     58  CA  GLN   147      -8.872  -4.818  -5.716  1.00  0.00              
ATOM     59  C   GLN   147      -8.794  -5.192  -7.204  1.00  0.00              
ATOM     60  O   GLN   147      -9.491  -6.098  -7.650  1.00  0.00              
ATOM     61  N   ALA   148      -7.904  -4.526  -7.956  1.00  0.00              
ATOM     62  CA  ALA   148      -7.703  -4.793  -9.382  1.00  0.00              
ATOM     63  C   ALA   148      -6.733  -5.948  -9.754  1.00  0.00              
ATOM     64  O   ALA   148      -6.158  -5.956 -10.844  1.00  0.00              
ATOM     65  N   ARG   149      -6.450  -6.802  -8.769  1.00  0.00              
ATOM     66  CA  ARG   149      -5.797  -8.129  -8.912  1.00  0.00              
ATOM     67  C   ARG   149      -4.444  -8.190  -9.643  1.00  0.00              
ATOM     68  O   ARG   149      -3.922  -9.262  -9.934  1.00  0.00              
ATOM     69  N   HIS   150      -3.719  -7.078  -9.543  1.00  0.00              
ATOM     70  CA  HIS   150      -2.446  -6.875 -10.269  1.00  0.00              
ATOM     71  C   HIS   150      -1.178  -7.348  -9.539  1.00  0.00              
ATOM     72  O   HIS   150      -0.062  -7.086 -10.002  1.00  0.00              
ATOM     73  N   GLY   151      -1.354  -7.976  -8.375  1.00  0.00              
ATOM     74  CA  GLY   151      -0.273  -8.343  -7.446  1.00  0.00              
ATOM     75  C   GLY   151       0.473  -7.128  -6.847  1.00  0.00              
ATOM     76  O   GLY   151       1.591  -7.266  -6.349  1.00  0.00              
ATOM     77  N   THR   152      -0.203  -5.989  -6.868  1.00  0.00              
ATOM     78  CA  THR   152       0.300  -4.685  -6.372  1.00  0.00              
ATOM     79  C   THR   152      -0.846  -3.948  -5.653  1.00  0.00              
ATOM     80  O   THR   152      -1.968  -4.444  -5.562  1.00  0.00              
ATOM     81  N   PRO   153      -0.476  -2.838  -5.024  1.00  0.00              
ATOM     82  CA  PRO   153      -1.406  -1.772  -4.597  1.00  0.00              
ATOM     83  C   PRO   153      -0.934  -0.431  -5.214  1.00  0.00              
ATOM     84  O   PRO   153       0.250  -0.217  -5.411  1.00  0.00              
ATOM     85  N   ASP   154      -1.901   0.413  -5.543  1.00  0.00              
ATOM     86  CA  ASP   154      -1.683   1.771  -6.059  1.00  0.00              
ATOM     87  C   ASP   154      -2.260   2.876  -5.171  1.00  0.00              
ATOM     88  O   ASP   154      -3.034   2.633  -4.249  1.00  0.00              
ATOM     89  N   SER   155      -2.028   4.099  -5.635  1.00  0.00              
ATOM     90  CA  SER   155      -2.359   5.359  -4.942  1.00  0.00              
ATOM     91  C   SER   155      -3.738   5.492  -4.269  1.00  0.00              
ATOM     92  O   SER   155      -3.835   5.862  -3.102  1.00  0.00              
ATOM     93  N   ARG   156      -4.798   5.086  -4.965  1.00  0.00              
ATOM     94  CA  ARG   156      -6.166   5.165  -4.428  1.00  0.00              
ATOM     95  C   ARG   156      -6.487   4.137  -3.339  1.00  0.00              
ATOM     96  O   ARG   156      -6.940   4.452  -2.235  1.00  0.00              
ATOM     97  N   LEU   157      -6.092   2.921  -3.671  1.00  0.00              
ATOM     98  CA  LEU   157      -6.007   1.752  -2.777  1.00  0.00              
ATOM     99  C   LEU   157      -5.212   2.048  -1.491  1.00  0.00              
ATOM    100  O   LEU   157      -5.660   1.718  -0.391  1.00  0.00              
ATOM    101  N   LEU   158      -4.106   2.791  -1.644  1.00  0.00              
ATOM    102  CA  LEU   158      -3.293   3.298  -0.515  1.00  0.00              
ATOM    103  C   LEU   158      -4.100   4.115   0.511  1.00  0.00              
ATOM    104  O   LEU   158      -3.966   3.870   1.707  1.00  0.00              
ATOM    105  N   ALA   159      -5.017   4.948   0.020  1.00  0.00              
ATOM    106  CA  ALA   159      -5.968   5.728   0.837  1.00  0.00              
ATOM    107  C   ALA   159      -6.686   4.879   1.892  1.00  0.00              
ATOM    108  O   ALA   159      -6.467   5.055   3.086  1.00  0.00              
ATOM    109  N   GLU   160      -7.265   3.781   1.401  1.00  0.00              
ATOM    110  CA  GLU   160      -7.969   2.779   2.237  1.00  0.00              
ATOM    111  C   GLU   160      -7.092   2.219   3.373  1.00  0.00              
ATOM    112  O   GLU   160      -7.483   2.265   4.534  1.00  0.00              
ATOM    113  N   ILE   161      -5.847   1.893   3.021  1.00  0.00              
ATOM    114  CA  ILE   161      -4.851   1.338   3.964  1.00  0.00              
ATOM    115  C   ILE   161      -4.499   2.399   5.038  1.00  0.00              
ATOM    116  O   ILE   161      -4.628   2.127   6.228  1.00  0.00              
ATOM    117  N   ILE   162      -4.197   3.617   4.580  1.00  0.00              
ATOM    118  CA  ILE   162      -3.877   4.772   5.463  1.00  0.00              
ATOM    119  C   ILE   162      -4.918   5.108   6.531  1.00  0.00              
ATOM    120  O   ILE   162      -4.590   5.411   7.667  1.00  0.00              
ATOM    121  N   HIS   163      -6.174   5.033   6.106  1.00  0.00              
ATOM    122  CA  HIS   163      -7.356   5.273   6.964  1.00  0.00              
ATOM    123  C   HIS   163      -7.421   4.303   8.168  1.00  0.00              
ATOM    124  O   HIS   163      -7.876   4.670   9.252  1.00  0.00              
ATOM    125  N   ALA   164      -6.963   3.076   7.944  1.00  0.00              
ATOM    126  CA  ALA   164      -6.964   1.994   8.944  1.00  0.00              
ATOM    127  C   ALA   164      -5.744   2.008   9.888  1.00  0.00              
ATOM    128  O   ALA   164      -4.601   2.062   9.453  1.00  0.00              
ATOM    129  N   GLY   165      -5.985   2.008  11.194  1.00  0.00              
ATOM    130  CA  GLY   165      -7.282   2.201  11.878  1.00  0.00              
ATOM    131  C   GLY   165      -7.225   3.457  12.763  1.00  0.00              
ATOM    132  O   GLY   165      -6.583   3.448  13.817  1.00  0.00              
ATOM    133  N   GLY   166      -7.633   4.565  12.144  1.00  0.00              
ATOM    134  CA  GLY   166      -7.704   5.888  12.806  1.00  0.00              
ATOM    135  C   GLY   166      -8.952   6.060  13.682  1.00  0.00              
ATOM    136  O   GLY   166      -9.513   5.129  14.249  1.00  0.00              
END
