REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0048AL277_1_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : DEERFIELD 
REMARK  ---------------------------------------------------------- 
TARGET T0048  
AUTHOR 8120-3487-1357  
REMARK Matrix Used: BS_30_25%   
REMARK Alignment Method Used: Quasi-Global Dynamic Programming  
METHOD Sequence-Structure alignment based on the environments  
METHOD published in: Deerfield, Holland-Minkley, Geigel, and   
METHOD Nicholas 1997. "Classification of the Environment of   
METHOD Protein Residues" J. Prot. Chem. 16:441-446.  
METHOD   
METHOD This test uses our latest (unpublished) environment   
METHOD classifications and extentions.  
MODEL  1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1sdb_B 
ATOM      1  N   MET     1      15.885  17.813  12.494  1.00  0.00              
ATOM      2  CA  MET     1      16.295  18.689  13.585  1.00  0.00              
ATOM      3  C   MET     1      17.515  18.181  14.322  1.00  0.00              
ATOM      4  O   MET     1      18.576  17.939  13.704  1.00  0.00              
ATOM      5  N   THR     2      17.377  18.076  15.609  1.00  0.00              
ATOM      6  CA  THR     2      18.378  17.615  16.561  1.00  0.00              
ATOM      7  C   THR     2      18.945  16.254  16.263  1.00  0.00              
ATOM      8  O   THR     2      20.160  16.035  16.427  1.00  0.00              
ATOM      9  N   ALA     3      18.128  15.326  15.809  1.00  0.00              
ATOM     10  CA  ALA     3      18.504  13.961  15.406  1.00  0.00              
ATOM     11  C   ALA     3      19.398  13.987  14.170  1.00  0.00              
ATOM     12  O   ALA     3      20.318  13.154  14.053  1.00  0.00              
ATOM     13  N   LEU     4      19.126  14.908  13.262  1.00  0.00              
ATOM     14  CA  LEU     4      19.976  15.098  12.074  1.00  0.00              
ATOM     15  C   LEU     4      21.370  15.541  12.512  1.00  0.00              
ATOM     16  O   LEU     4      22.392  15.063  12.004  1.00  0.00              
ATOM     17  N   THR     5      21.503  16.535  13.363  1.00  0.00              
ATOM     18  CA  THR     5      22.807  17.024  13.778  1.00  0.00              
ATOM     19  C   THR     5      23.532  15.927  14.560  1.00  0.00              
ATOM     20  O   THR     5      24.748  15.750  14.353  1.00  0.00              
ATOM     21  N   GLN     6      22.806  15.170  15.413  1.00  0.00              
ATOM     22  CA  GLN     6      23.532  14.096  16.118  1.00  0.00              
ATOM     23  C   GLN     6      24.060  13.064  15.144  1.00  0.00              
ATOM     24  O   GLN     6      25.171  12.528  15.262  1.00  0.00              
ATOM     25  N   ALA     7      23.273  12.729  14.104  1.00  0.00              
ATOM     26  CA  ALA     7      23.735  11.705  13.142  1.00  0.00              
ATOM     27  C   ALA     7      24.933  12.250  12.314  1.00  0.00              
ATOM     28  O   ALA     7      25.801  11.429  11.925  1.00  0.00              
ATOM     29  N   HIS     8      24.922  13.535  12.013  1.00  0.00              
ATOM     30  CA  HIS     8      26.037  14.172  11.291  1.00  0.00              
ATOM     31  C   HIS     8      27.285  14.183  12.223  1.00  0.00              
ATOM     32  O   HIS     8      28.326  13.922  11.603  1.00  0.00              
ATOM     33  N   CYS     9      27.155  14.401  13.490  1.00  0.00              
ATOM     34  CA  CYS     9      28.222  14.368  14.492  1.00  0.00              
ATOM     35  C   CYS     9      28.935  13.016  14.419  1.00  0.00              
ATOM     36  O   CYS     9      30.161  12.905  14.361  1.00  0.00              
ATOM     37  N   GLU    10      28.143  11.960  14.451  1.00  0.00              
ATOM     38  CA  GLU    10      28.762  10.613  14.439  1.00  0.00              
ATOM     39  C   GLU    10      29.279  10.231  13.074  1.00  0.00              
ATOM     40  O   GLU    10      30.298   9.503  13.053  1.00  0.00              
ATOM     41  N   ALA    11      28.634  10.587  11.975  1.00  0.00              
ATOM     42  CA  ALA    11      29.106  10.137  10.652  1.00  0.00              
ATOM     43  C   ALA    11      30.428  10.848  10.277  1.00  0.00              
ATOM     44  O   ALA    11      31.387  10.237   9.736  1.00  0.00              
ATOM     45  N   CYS    12      30.462  12.137  10.483  1.00  0.00              
ATOM     46  CA  CYS    12      31.499  13.100  10.167  1.00  0.00              
ATOM     47  C   CYS    12      32.673  13.075  11.124  1.00  0.00              
ATOM     48  O   CYS    12      33.818  13.193  10.629  1.00  0.00              
ATOM     49  N   ARG    13      32.462  12.826  12.383  1.00  0.00              
ATOM     50  CA  ARG    13      33.521  12.799  13.400  1.00  0.00              
ATOM     51  C   ARG    13      34.284  14.135  13.357  1.00  0.00              
ATOM     52  O   ARG    13      33.724  15.219  13.105  1.00  0.00              
ATOM     53  N   ALA    14      35.607  13.958  13.403  1.00  0.00              
ATOM     54  CA  ALA    14      36.562  15.073  13.408  1.00  0.00              
ATOM     55  C   ALA    14      36.502  15.942  12.187  1.00  0.00              
ATOM     56  O   ALA    14      36.978  17.108  12.211  1.00  0.00              
ATOM     57  N   ASP    15      35.965  15.505  11.045  1.00  0.00              
ATOM     58  CA  ASP    15      35.835  16.333   9.856  1.00  0.00              
ATOM     59  C   ASP    15      34.918  17.547  10.081  1.00  0.00              
ATOM     60  O   ASP    15      35.067  18.616   9.458  1.00  0.00              
ATOM     61  N   ALA    16      33.876  17.236  10.877  1.00  0.00              
ATOM     62  CA  ALA    16      32.872  18.318  11.065  1.00  0.00              
ATOM     63  C   ALA    16      31.946  18.306   9.832  1.00  0.00              
ATOM     64  O   ALA    16      32.037  17.477   8.941  1.00  0.00              
ATOM     65  N   PRO    17      31.092  19.306   9.716  1.00  0.00              
ATOM     66  CA  PRO    17      30.097  19.385   8.620  1.00  0.00              
ATOM     67  C   PRO    17      29.856  20.837   8.221  1.00  0.00              
ATOM     68  O   PRO    17      29.642  21.683   9.075  1.00  0.00              
END
