REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0044AL017_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : SJOLANDER-THOMAS 
REMARK  ---------------------------------------------------------- 
TARGET T0044  
AUTHOR 5827-4749-3439  
REMARK HMM prediction for t0044  
METHOD Note: this alignment was generated automatically, and has not  
METHOD been hand-edited.  
METHOD Step 1: Using Psi-BLAST, we identified a set of 16 putative  
METHOD homologs to t0044 (one sequence was rejected because it was  
METHOD a short fragment).  
METHOD  
METHOD Step 2: We constructed an HMM using the UCSC SAM software,  
METHOD as follows.  
METHOD  2.1 We used modelfromalign to create an HMM from the  
METHOD t0044 sequence, treating the sequence as if it were an  
METHOD alignment, to effect a 1-1 correspondence between HMM  
METHOD positions and t0044 sequence positions.  
METHOD  2.2 We reestimated the HMM parameters of the model  
METHOD produced in step 2.1 in two stages. First, we using the  
METHOD training sequences found in iteration 0 of PSI-BLAST,  
METHOD disallowing model surgery (the insertion or deletion of  
METHOD nodes in the HMM), to retain the 1-1 correspondence between  
METHOD the HMM positions and t0044 sequence positions. Then we  
METHOD retrained the HMM using all the sequences, again,  
METHOD disallowing surgery, and employing Dirichlet mixture priors  
METHOD to increase sensitivity.  
METHOD  
METHOD Step 3: We scored a sequence version of PDB with the final  
METHOD HMM, using hmmscore and local-local alignment scoring  
METHOD (-swscore 2).  
METHOD  
METHOD Step 4: We scored each of the training set sequences against  
METHOD an HMM library for a non-redundant set of PDB structures,  
METHOD using the same method as in Step 3. We also ran t0044  
METHOD against the UCSC HMM library using their server, for  
METHOD comparison.  
METHOD  
METHOD Step 5: We identified subfamilies in the t0044 homologs  
METHOD using Bete (Sjolander's phylogenetic tree method, ISMB98  
METHOD proceedings), and constructed subfamily HMMs for each  
METHOD subfamily (unpublished method). The subfamily decomposition  
METHOD produced two subfamilies: subfamily 1 consisted of  
METHOD RTC1_CAEEL, RTC1_DROME, RTC1_SCHPO, and RTC1_YEAST. All  
METHOD other t0044 homologs, including t0044, were in subfamily 0.  
METHOD These subfamily HMMs were used to score PDB sequences.  
METHOD  
METHOD Steps 3-5 yielded a list of potential matches for us to  
METHOD examine. Several of the methods employed (especially the  
METHOD subfamily HMMs, and the use of the UCSC server) gave very  
METHOD strong scores to 1eps. (We also considered matches to other  
METHOD PDB structures, but none of these were convincing, and were  
METHOD not pursued.)  
METHOD  
METHOD We created a new search database with 1eps and t0044  
METHOD homologs added to a non-redundant PDB set. Subfamily HMM  
METHOD scores of these sequences ranked 1eps and several 1eps  
METHOD homologs above all non-t0044 homologs for both subfamilies.  
METHOD  
METHOD We then examined the alignments of t0044 sequences and 1eps  
METHOD sequences to each subfamily model, and the alignments of  
METHOD each family separately. This analysis suggested the pairwise  
METHOD alignment of t0044 and 1eps to the t0044 subfamily 1 model  
METHOD would be more likely from a structural standpoint.  
MODEL  1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1eps 
ATOM      1  CA  LEU     8      41.629  45.696  -8.153  1.00  0.00              
ATOM      2  CA  ASP     9      44.545  43.832  -6.889  1.00  0.00              
ATOM      3  CA  GLY    10      43.880  42.670  -3.154  1.00  0.00              
ATOM      4  CA  ALA    11      46.820  41.647  -1.039  1.00  0.00              
ATOM      5  CA  GLN    12      45.417  39.030   1.200  1.00  0.00              
ATOM      6  CA  GLY    13      47.034  37.079   3.864  1.00  0.00              
ATOM      7  CA  GLU    14      50.347  36.779   5.052  1.00  0.00              
ATOM      8  CA  GLY    15      48.649  33.413   5.011  1.00  0.00              
ATOM      9  CA  GLY    16      45.024  34.602   5.272  1.00  0.00              
ATOM     10  CA  GLY    17      42.113  31.991   5.440  1.00  0.00              
ATOM     11  CA  GLN    18      40.236  34.738   3.388  1.00  0.00              
ATOM     12  CA  ILE    19      41.769  33.946  -0.007  1.00  0.00              
ATOM     13  CA  LEU    20      39.879  30.673  -0.476  1.00  0.00              
ATOM     14  CA  ARG    21      36.382  32.152   0.303  1.00  0.00              
ATOM     15  CA  SER    22      37.150  35.401  -1.655  1.00  0.00              
ATOM     16  CA  ALA    23      38.557  33.456  -4.670  1.00  0.00              
ATOM     17  CA  LEU    24      35.237  31.719  -5.077  1.00  0.00              
ATOM     18  CA  SER    25      32.829  34.617  -4.183  1.00  0.00              
ATOM     19  CA  LEU    26      34.423  37.055  -6.458  1.00  0.00              
ATOM     20  CA  SER    27      33.843  34.455  -9.323  1.00  0.00              
ATOM     21  CA  MET    28      30.161  35.471  -9.260  1.00  0.00              
ATOM     22  CA  ILE    29      30.007  39.096 -10.386  1.00  0.00              
ATOM     23  CA  THR    30      32.072  39.622 -13.601  1.00  0.00              
ATOM     24  CA  GLY    31      34.843  41.715 -12.236  1.00  0.00              
ATOM     25  CA  GLN    32      38.661  41.611 -12.877  1.00  0.00              
ATOM     26  CA  PRO    33      40.541  41.310  -9.655  1.00  0.00              
ATOM     27  CA  PHE    34      43.864  39.844  -8.800  1.00  0.00              
ATOM     28  CA  THR    35      44.002  38.000  -5.503  1.00  0.00              
ATOM     29  CA  ILE    36      47.653  37.793  -4.141  1.00  0.00              
ATOM     30  CA  THR    37      49.377  37.317  -0.825  1.00  0.00              
ATOM     31  CA  SER    38      52.572  37.139   1.015  1.00  0.00              
ATOM     32  CA  ILE    39      55.206  34.524  -0.232  1.00  0.00              
ATOM     33  CA  ARG    40      53.852  31.797   2.061  1.00  0.00              
ATOM     34  CA  ALA    41      50.401  32.190   0.442  1.00  0.00              
ATOM     35  CA  GLY    42      52.068  31.883  -2.964  1.00  0.00              
ATOM     36  CA  ARG    43      53.433  28.470  -1.860  1.00  0.00              
ATOM     37  CA  ALA    44      49.968  27.422  -0.563  1.00  0.00              
ATOM     38  CA  LYS    45      48.001  25.430  -3.102  1.00  0.00              
ATOM     39  CA  PRO    46      44.666  26.485  -4.521  1.00  0.00              
ATOM     40  CA  GLY    47      44.471  24.358  -7.639  1.00  0.00              
ATOM     41  CA  GLN    51      41.757  22.207  -6.264  1.00  0.00              
ATOM     42  CA  HIS    52      39.384  25.120  -5.844  1.00  0.00              
ATOM     43  CA  LEU    53      40.100  26.879  -9.110  1.00  0.00              
ATOM     44  CA  THR    54      39.258  23.580 -10.808  1.00  0.00              
ATOM     45  CA  ALA    55      35.843  23.138  -9.358  1.00  0.00              
ATOM     46  CA  VAL    56      35.062  26.872  -9.843  1.00  0.00              
ATOM     47  CA  LYS    57      36.139  26.730 -13.502  1.00  0.00              
ATOM     48  CA  ALA    58      33.906  23.495 -13.787  1.00  0.00              
ATOM     49  CA  ALA    59      32.063  28.446 -15.390  1.00  0.00              
ATOM     50  CA  THR    60      34.434  30.706 -13.348  1.00  0.00              
ATOM     51  CA  GLU    61      37.097  32.550 -15.399  1.00  0.00              
ATOM     52  CA  ILE    62      40.471  32.286 -13.617  1.00  0.00              
ATOM     53  CA  CYS    63      44.087  32.891 -14.723  1.00  0.00              
ATOM     54  CA  GLY    64      47.037  31.699 -12.547  1.00  0.00              
ATOM     55  CA  ALA    65      49.203  34.694 -12.800  1.00  0.00              
ATOM     56  CA  THR    66      52.423  33.052 -11.764  1.00  0.00              
ATOM     57  CA  VAL    67      52.399  29.307 -10.962  1.00  0.00              
ATOM     58  CA  GLU    68      49.630  27.162 -12.281  1.00  0.00              
ATOM     59  CA  GLY    69      47.923  25.974  -9.152  1.00  0.00              
ATOM     60  CA  PHE    79      48.940  28.770  -6.736  1.00  0.00              
ATOM     61  CA  ARG    80      47.985  32.475  -5.935  1.00  0.00              
ATOM     62  CA  PRO    81      48.037  35.015  -7.569  1.00  0.00              
ATOM     63  CA  GLY    82      44.809  34.428  -9.269  1.00  0.00              
ATOM     64  CA  THR    83      43.174  36.698 -11.768  1.00  0.00              
ATOM     65  CA  VAL    84      39.455  36.523 -11.359  1.00  0.00              
ATOM     66  CA  ARG    85      37.322  37.545 -14.275  1.00  0.00              
ATOM     67  CA  GLY    86      34.113  36.173 -12.882  1.00  0.00              
ATOM     68  CA  GLY    87      31.406  34.321 -14.752  1.00  0.00              
ATOM     69  CA  ASP    88      30.812  31.283 -12.470  1.00  0.00              
ATOM     70  CA  TYR    89      27.232  30.344 -12.913  1.00  0.00              
ATOM     71  CA  ARG    90      27.912  20.058 -11.085  1.00  0.00              
ATOM     72  CA  PHE    91      31.265  20.878  -9.474  1.00  0.00              
ATOM     73  CA  ALA    92      33.000  17.592  -8.812  1.00  0.00              
ATOM     74  CA  ILE    93      35.016  18.058  -5.550  1.00  0.00              
ATOM     75  CA  GLY    94      36.777  15.091  -3.811  1.00  0.00              
ATOM     76  CA  SER    95      36.755  14.423  -0.025  1.00  0.00              
ATOM     77  CA  ALA    96      40.385  14.712   1.174  1.00  0.00              
ATOM     78  CA  GLY    97      40.207  18.155  -0.409  1.00  0.00              
ATOM     79  CA  SER    98      40.877  20.828   2.363  1.00  0.00              
ATOM     80  CA  THR   100      37.273  21.848   3.069  1.00  0.00              
ATOM     81  CA  LEU   101      38.435  25.535   3.145  1.00  0.00              
ATOM     82  CA  VAL   102      37.874  24.916  -0.556  1.00  0.00              
ATOM     83  CA  LEU   103      34.495  23.240  -0.164  1.00  0.00              
ATOM     84  CA  GLN   104      33.406  25.952   2.344  1.00  0.00              
ATOM     85  CA  THR   105      34.382  28.564  -0.256  1.00  0.00              
ATOM     86  CA  VAL   106      32.127  26.760  -2.789  1.00  0.00              
ATOM     87  CA  LEU   107      29.112  26.309  -0.532  1.00  0.00              
ATOM     88  CA  PRO   108      29.162  29.977   0.414  1.00  0.00              
ATOM     89  CA  ALA   109      29.137  31.424  -3.127  1.00  0.00              
ATOM     90  CA  LEU   110      26.786  28.924  -4.765  1.00  0.00              
ATOM     91  CA  TRP   111      23.242  30.117  -3.469  1.00  0.00              
ATOM     92  CA  PHE   112      23.900  33.250  -5.366  1.00  0.00              
ATOM     93  CA  ALA   113      24.938  31.556  -8.599  1.00  0.00              
ATOM     94  CA  ASP   114      21.957  31.854 -11.218  1.00  0.00              
ATOM     95  CA  GLY   115      21.805  28.236 -11.935  1.00  0.00              
ATOM     96  CA  PRO   116      21.487  25.496  -9.453  1.00  0.00              
ATOM     97  CA  SER   117      24.606  23.682  -8.460  1.00  0.00              
ATOM     98  CA  ARG   118      25.216  20.323  -6.766  1.00  0.00              
ATOM     99  CA  VAL   119      28.629  19.477  -5.299  1.00  0.00              
ATOM    100  CA  GLU   120      29.684  15.846  -5.249  1.00  0.00              
ATOM    101  CA  VAL   121      32.527  14.561  -3.169  1.00  0.00              
ATOM    102  CA  SER   122      34.332  12.147  -5.366  1.00  0.00              
ATOM    103  CA  GLY   123      36.945  10.802  -2.889  1.00  0.00              
ATOM    104  CA  GLY   124      34.445  10.862  -0.131  1.00  0.00              
ATOM    105  CA  THR   125      34.026  11.231   3.641  1.00  0.00              
ATOM    106  CA  ASP   126      35.311  14.823   3.595  1.00  0.00              
ATOM    107  CA  ASN   127      38.031  15.639   6.085  1.00  0.00              
ATOM    108  CA  PRO   128      35.963  18.000   8.465  1.00  0.00              
ATOM    109  CA  SER   129      32.136  17.413   8.393  1.00  0.00              
ATOM    110  CA  ALA   130      32.744  20.868  10.081  1.00  0.00              
ATOM    111  CA  PRO   131      31.339  22.054   7.068  1.00  0.00              
ATOM    112  CA  PRO   132      28.524  22.044   9.657  1.00  0.00              
ATOM    113  CA  ALA   133      29.966  25.329  11.012  1.00  0.00              
ATOM    114  CA  LEU   140      29.681  26.704   7.431  1.00  0.00              
ATOM    115  CA  GLU   141      26.192  25.243   6.794  1.00  0.00              
ATOM    116  CA  PRO   142      24.856  26.546  10.113  1.00  0.00              
ATOM    117  CA  LEU   143      26.291  30.028   9.290  1.00  0.00              
ATOM    118  CA  LEU   144      24.625  29.809   5.978  1.00  0.00              
ATOM    119  CA  ALA   145      21.176  29.122   7.630  1.00  0.00              
ATOM    120  CA  LYS   146      21.732  31.909  10.052  1.00  0.00              
ATOM    121  CA  ILE   147      22.196  34.084   7.023  1.00  0.00              
ATOM    122  CA  GLY   148      19.126  32.505   5.432  1.00  0.00              
ATOM    123  CA  ILE   149      20.048  29.916   2.797  1.00  0.00              
ATOM    124  CA  HIS   150      19.214  26.417   2.383  1.00  0.00              
ATOM    125  CA  GLN   151      21.365  23.725   1.080  1.00  0.00              
ATOM    126  CA  GLN   152      20.395  20.067   1.030  1.00  0.00              
ATOM    127  CA  THR   153      23.251  18.007   2.526  1.00  0.00              
ATOM    128  CA  THR   154      22.511  14.455   1.457  1.00  0.00              
ATOM    129  CA  ALA   169      24.957  12.802   3.630  1.00  0.00              
ATOM    130  CA  THR   170      28.300  14.440   2.947  1.00  0.00              
ATOM    131  CA  GLU   171      28.430  13.028  -0.521  1.00  0.00              
ATOM    132  CA  VAL   172      26.290  15.501  -2.442  1.00  0.00              
ATOM    133  CA  SER   173      25.130  18.974  -1.544  1.00  0.00              
ATOM    134  CA  PRO   174      22.288  20.471  -3.566  1.00  0.00              
ATOM    135  CA  VAL   175      22.102  24.226  -3.656  1.00  0.00              
ATOM    136  CA  ALA   176      19.484  26.116  -5.511  1.00  0.00              
ATOM    137  CA  SER   177      20.949  29.009  -7.402  1.00  0.00              
ATOM    138  CA  PHE   178      19.099  32.319  -7.380  1.00  0.00              
ATOM    139  CA  ASN   179      19.068  32.962  -3.615  1.00  0.00              
ATOM    140  CA  THR   180      20.235  35.885  -1.421  1.00  0.00              
ATOM    141  CA  LEU   181      21.703  35.956   2.030  1.00  0.00              
ATOM    142  CA  GLN   182      19.576  38.004   4.543  1.00  0.00              
ATOM    143  CA  LEU   183      20.891  39.691   7.631  1.00  0.00              
ATOM    144  CA  GLY   187      20.416  38.005  10.973  1.00  0.00              
ATOM    145  CA  ASN   188      20.575  41.454  12.547  1.00  0.00              
ATOM    146  CA  ILE   189      23.237  40.442  15.026  1.00  0.00              
ATOM    147  CA  VAL   190      25.649  37.646  14.847  1.00  0.00              
ATOM    148  CA  GLN   191      28.130  36.848  17.669  1.00  0.00              
ATOM    149  CA  MET   192      31.316  35.216  16.406  1.00  0.00              
ATOM    150  CA  ARG   193      31.776  32.946  19.281  1.00  0.00              
ATOM    151  CA  GLY   194      34.878  32.104  21.107  1.00  0.00              
ATOM    152  CA  GLU   195      35.919  28.585  22.111  1.00  0.00              
ATOM    153  CA  VAL   196      33.216  26.954  24.305  1.00  0.00              
ATOM    154  CA  LEU   197      35.705  24.668  26.022  1.00  0.00              
ATOM    155  CA  LEU   198      37.880  27.518  27.483  1.00  0.00              
ATOM    156  CA  VAL   201      34.638  28.814  29.080  1.00  0.00              
ATOM    157  CA  PRO   202      34.484  25.828  31.352  1.00  0.00              
ATOM    158  CA  ARG   203      37.426  26.687  33.597  1.00  0.00              
ATOM    159  CA  HIS   204      35.947  30.021  34.432  1.00  0.00              
ATOM    160  CA  VAL   205      32.482  28.826  34.878  1.00  0.00              
ATOM    161  CA  ALA   206      33.496  25.884  37.088  1.00  0.00              
ATOM    162  CA  GLU   207      35.560  28.368  39.110  1.00  0.00              
ATOM    163  CA  ARG   208      32.421  30.512  39.984  1.00  0.00              
ATOM    164  CA  GLU   209      30.479  27.285  40.772  1.00  0.00              
ATOM    165  CA  ILE   210      33.323  26.476  43.257  1.00  0.00              
ATOM    166  CA  ALA   211      34.489  29.683  44.851  1.00  0.00              
ATOM    167  CA  THR   212      31.437  31.529  44.335  1.00  0.00              
ATOM    168  CA  LEU   213      30.479  34.913  43.269  1.00  0.00              
ATOM    169  CA  ALA   214      29.620  35.284  39.585  1.00  0.00              
ATOM    170  CA  GLY   215      31.626  34.815  36.429  1.00  0.00              
ATOM    171  CA  SER   216      31.777  35.749  23.633  1.00  0.00              
ATOM    172  CA  PHE   217      29.744  32.563  23.957  1.00  0.00              
ATOM    173  CA  SER   218      25.963  32.449  24.000  1.00  0.00              
ATOM    174  CA  LEU   219      22.480  31.135  24.100  1.00  0.00              
ATOM    175  CA  HIS   220      22.576  30.439  20.458  1.00  0.00              
ATOM    176  CA  GLU   221      25.763  28.323  20.515  1.00  0.00              
ATOM    177  CA  GLN   222      25.944  25.392  18.199  1.00  0.00              
ATOM    178  CA  ASN   223      29.177  24.367  20.001  1.00  0.00              
ATOM    179  CA  ILE   224      29.363  21.017  21.663  1.00  0.00              
ATOM    180  CA  HIS   225      31.032  21.971  24.955  1.00  0.00              
ATOM    181  CA  ASN   226      28.488  24.636  25.956  1.00  0.00              
ATOM    182  CA  LEU   227      26.426  21.590  27.066  1.00  0.00              
ATOM    183  CA  PRO   228      28.938  21.478  29.993  1.00  0.00              
ATOM    184  CA  ARG   229      27.065  24.368  31.528  1.00  0.00              
ATOM    185  CA  ASP   230      24.206  21.894  31.864  1.00  0.00              
ATOM    186  CA  GLN   231      26.545  19.652  33.902  1.00  0.00              
ATOM    187  CA  GLY   232      27.398  22.382  36.463  1.00  0.00              
ATOM    188  CA  PRO   233      23.764  23.318  36.635  1.00  0.00              
ATOM    189  CA  GLY   234      23.018  19.653  37.543  1.00  0.00              
ATOM    190  CA  ASN   235      25.810  19.884  40.140  1.00  0.00              
ATOM    191  CA  THR   236      23.805  22.656  41.805  1.00  0.00              
ATOM    192  CA  VAL   237      25.277  25.822  40.191  1.00  0.00              
ATOM    193  CA  SER   238      22.898  28.428  38.683  1.00  0.00              
ATOM    194  CA  LEU   239      23.472  28.950  34.934  1.00  0.00              
ATOM    195  CA  GLU   240      22.114  32.180  33.539  1.00  0.00              
ATOM    196  CA  GLU   244      22.308  32.175  29.635  1.00  0.00              
ATOM    197  CA  ASN   245      22.624  35.452  27.591  1.00  0.00              
ATOM    198  CA  ILE   246      23.097  36.659  24.057  1.00  0.00              
ATOM    199  CA  THR   247      26.746  37.202  24.002  1.00  0.00              
ATOM    200  CA  GLU   248      27.246  35.645  27.502  1.00  0.00              
ATOM    201  CA  ARG   249      26.775  32.864  29.890  1.00  0.00              
ATOM    202  CA  PHE   250      27.109  33.349  33.703  1.00  0.00              
ATOM    203  CA  PHE   251      27.747  31.006  36.522  1.00  0.00              
ATOM    204  CA  VAL   252      26.756  31.916  40.139  1.00  0.00              
ATOM    205  CA  VAL   253      27.807  29.548  42.984  1.00  0.00              
ATOM    206  CA  GLY   254      25.051  27.477  44.449  1.00  0.00              
ATOM    207  CA  GLU   255      25.453  23.948  45.766  1.00  0.00              
ATOM    208  CA  LYS   272      28.034  21.601  44.098  1.00  0.00              
ATOM    209  CA  ARG   273      27.006  18.031  44.630  1.00  0.00              
ATOM    210  CA  TYR   274      28.484  14.898  43.102  1.00  0.00              
ATOM    211  CA  LEU   275      27.389  13.396  39.746  1.00  0.00              
ATOM    212  CA  ALA   276      27.358  10.136  37.894  1.00  0.00              
ATOM    213  CA  SER   277      27.171  10.940  34.298  1.00  0.00              
ATOM    214  CA  THR   278      28.257   9.888  30.754  1.00  0.00              
ATOM    215  CA  ALA   279      30.699  12.434  29.697  1.00  0.00              
ATOM    216  CA  ALA   280      31.362  10.865  26.347  1.00  0.00              
ATOM    217  CA  VAL   281      29.694  13.787  24.626  1.00  0.00              
ATOM    218  CA  GLY   282      31.722  16.537  26.358  1.00  0.00              
ATOM    219  CA  GLU   283      35.002  14.776  27.119  1.00  0.00              
ATOM    220  CA  TYR   284      37.419  17.735  26.743  1.00  0.00              
ATOM    221  CA  LEU   285      35.378  20.005  28.910  1.00  0.00              
ATOM    222  CA  ALA   286      34.564  16.993  31.211  1.00  0.00              
ATOM    223  CA  ASP   287      38.230  17.129  32.304  1.00  0.00              
ATOM    224  CA  GLN   288      37.152  20.233  34.114  1.00  0.00              
ATOM    225  CA  LEU   289      34.375  18.282  36.032  1.00  0.00              
ATOM    226  CA  VAL   290      36.908  15.880  37.396  1.00  0.00              
ATOM    227  CA  LEU   291      38.906  18.595  39.252  1.00  0.00              
ATOM    228  CA  PRO   292      35.649  20.436  40.169  1.00  0.00              
ATOM    229  CA  MET   293      34.601  17.187  41.820  1.00  0.00              
ATOM    230  CA  ALA   294      37.361  17.683  44.466  1.00  0.00              
ATOM    231  CA  LEU   295      34.876  20.229  45.810  1.00  0.00              
ATOM    232  CA  ALA   296      31.496  18.411  45.338  1.00  0.00              
ATOM    233  CA  GLY   297      29.779  13.079  47.213  1.00  0.00              
ATOM    234  CA  ALA   298      31.532  10.740  44.785  1.00  0.00              
ATOM    235  CA  GLY   299      31.672  11.749  41.080  1.00  0.00              
ATOM    236  CA  GLU   300      31.867   9.008  38.412  1.00  0.00              
ATOM    237  CA  PHE   301      35.666   8.595  28.978  1.00  0.00              
ATOM    238  CA  THR   302      37.875   6.091  26.992  1.00  0.00              
ATOM    239  CA  VAL   303      38.758   8.881  24.485  1.00  0.00              
ATOM    240  CA  ALA   304      40.842  10.526  27.196  1.00  0.00              
ATOM    241  CA  HIS   305      43.146   7.519  26.830  1.00  0.00              
ATOM    242  CA  PRO   306      44.067   8.611  23.356  1.00  0.00              
ATOM    243  CA  SER   307      44.834  12.337  23.647  1.00  0.00              
ATOM    244  CA  CYS   308      48.750  12.262  23.374  1.00  0.00              
ATOM    245  CA  HIS   309      49.126  11.590  27.115  1.00  0.00              
ATOM    246  CA  LEU   310      46.495   9.159  28.648  1.00  0.00              
ATOM    247  CA  LEU   311      44.283  11.804  30.248  1.00  0.00              
ATOM    248  CA  THR   312      42.484   9.305  32.458  1.00  0.00              
ATOM    249  CA  ASN   313      45.720   7.842  33.871  1.00  0.00              
ATOM    250  CA  ILE   314      47.152  11.329  34.394  1.00  0.00              
ATOM    251  CA  ALA   315      43.909  12.791  35.840  1.00  0.00              
ATOM    252  CA  VAL   316      43.615   9.819  38.214  1.00  0.00              
ATOM    253  CA  VAL   317      47.368  10.064  39.194  1.00  0.00              
ATOM    254  CA  GLU   318      47.300  13.785  39.879  1.00  0.00              
ATOM    255  CA  ARG   319      43.959  13.745  41.786  1.00  0.00              
ATOM    256  CA  PHE   320      45.321  11.309  44.226  1.00  0.00              
ATOM    257  CA  LEU   321      48.399  13.606  44.851  1.00  0.00              
ATOM    258  CA  PRO   322      45.979  16.261  46.092  1.00  0.00              
ATOM    259  CA  VAL   323      44.100  13.866  48.375  1.00  0.00              
ATOM    260  CA  ARG   324      41.300  12.483  46.308  1.00  0.00              
ATOM    261  CA  PHE   325      40.469   8.761  46.416  1.00  0.00              
ATOM    262  CA  SER   326      40.163   7.740  42.840  1.00  0.00              
ATOM    263  CA  LEU   327      39.300   4.685  40.857  1.00  0.00              
ATOM    264  CA  ILE   328      40.662   4.701  37.339  1.00  0.00              
ATOM    265  CA  GLU   329      38.594   2.414  35.113  1.00  0.00              
ATOM    266  CA  THR   330      38.923   1.258  31.500  1.00  0.00              
ATOM    267  CA  ASP   331      36.789   4.235  30.500  1.00  0.00              
ATOM    268  CA  GLY   332      35.458   5.908  33.594  1.00  0.00              
ATOM    269  CA  VAL   333      36.904   7.617  36.693  1.00  0.00              
ATOM    270  CA  THR   334      35.274   7.659  40.178  1.00  0.00              
ATOM    271  CA  ARG   335      36.613  10.536  42.286  1.00  0.00              
ATOM    272  CA  VAL   336      35.917  10.717  45.973  1.00  0.00              
ATOM    273  CA  SER   337      36.959  14.019  47.519  1.00  0.00              
ATOM    274  CA  ILE   338      38.973  14.562  50.681  1.00  0.00              
ATOM    275  CA  GLU   339      38.112  16.815  53.644  1.00  0.00              
ATOM    276  CA  GLY   340      41.187  18.920  53.094  1.00  0.00              
ATOM    277  CA  SER   341      43.236  18.961  49.948  1.00  0.00              
ATOM    278  CA  HIS   342      46.959  18.511  50.112  1.00  0.00              
ATOM    279  CA  HIS   343      49.501  20.912  48.774  1.00  0.00              
ATOM    280  CA  HIS   344      50.710  18.987  45.682  1.00  0.00              
ATOM    281  CA  HIS   345      53.184  19.334  43.044  1.00  0.00              
ATOM    282  CA  HIS   346      51.064  18.378  39.872  1.00  0.00              
ATOM    283  CA  HIS   347      52.614  17.116  36.623  1.00  0.00              
END
