REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0043AL215_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0043  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1gky 
ATOM      1  N   ASN    19      26.912  43.617  57.102  1.00  0.00              
ATOM      2  CA  ASN    19      26.414  44.014  55.795  1.00  0.00              
ATOM      3  C   ASN    19      25.497  42.980  55.199  1.00  0.00              
ATOM      4  O   ASN    19      24.482  43.384  54.601  1.00  0.00              
ATOM      5  N   ALA    20      25.823  41.689  55.375  1.00  0.00              
ATOM      6  CA  ALA    20      24.932  40.624  54.912  1.00  0.00              
ATOM      7  C   ALA    20      23.564  40.769  55.549  1.00  0.00              
ATOM      8  O   ALA    20      22.548  40.705  54.856  1.00  0.00              
ATOM      9  N   ALA    21      23.492  41.009  56.857  1.00  0.00              
ATOM     10  CA  ALA    21      22.200  41.104  57.471  1.00  0.00              
ATOM     11  C   ALA    21      21.491  42.390  57.105  1.00  0.00              
ATOM     12  O   ALA    21      20.259  42.411  56.975  1.00  0.00              
ATOM     13  N   LEU    22      22.248  43.473  56.952  1.00  0.00              
ATOM     14  CA  LEU    22      21.672  44.740  56.543  1.00  0.00              
ATOM     15  C   LEU    22      20.925  44.543  55.226  1.00  0.00              
ATOM     16  O   LEU    22      19.776  45.001  55.067  1.00  0.00              
ATOM     17  N   LYS    23      21.558  43.836  54.276  1.00  0.00              
ATOM     18  CA  LYS    23      20.899  43.534  52.999  1.00  0.00              
ATOM     19  C   LYS    23      19.620  42.682  53.089  1.00  0.00              
ATOM     20  O   LYS    23      18.593  42.935  52.446  1.00  0.00              
ATOM     21  N   ALA    24      19.679  41.660  53.946  1.00  0.00              
ATOM     22  CA  ALA    24      18.563  40.802  54.263  1.00  0.00              
ATOM     23  C   ALA    24      17.409  41.631  54.787  1.00  0.00              
ATOM     24  O   ALA    24      16.304  41.531  54.272  1.00  0.00              
ATOM     25  N   LEU    25      17.590  42.421  55.834  1.00  0.00              
ATOM     26  CA  LEU    25      16.504  43.198  56.363  1.00  0.00              
ATOM     27  C   LEU    25      16.029  44.238  55.356  1.00  0.00              
ATOM     28  O   LEU    25      14.862  44.627  55.418  1.00  0.00              
ATOM     29  N   GLY    26      16.855  44.659  54.376  1.00  0.00              
ATOM     30  CA  GLY    26      16.454  45.635  53.367  1.00  0.00              
ATOM     31  C   GLY    26      15.521  45.020  52.346  1.00  0.00              
ATOM     32  O   GLY    26      14.497  45.622  52.012  1.00  0.00              
ATOM     33  N   ASP    27      15.888  43.839  51.854  1.00  0.00              
ATOM     34  CA  ASP    27      15.096  43.128  50.881  1.00  0.00              
ATOM     35  C   ASP    27      13.876  42.448  51.493  1.00  0.00              
ATOM     36  O   ASP    27      12.836  42.320  50.853  1.00  0.00              
ATOM     37  N   ILE    28      13.912  41.955  52.715  1.00  0.00              
ATOM     38  CA  ILE    28      12.753  41.313  53.263  1.00  0.00              
ATOM     39  C   ILE    28      12.349  41.892  54.623  1.00  0.00              
ATOM     40  O   ILE    28      12.289  41.155  55.625  1.00  0.00              
ATOM     41  N   PRO    29      11.926  43.186  54.681  1.00  0.00              
ATOM     42  CA  PRO    29      11.619  43.877  55.921  1.00  0.00              
ATOM     43  C   PRO    29      10.424  43.270  56.628  1.00  0.00              
ATOM     44  O   PRO    29      10.325  43.291  57.857  1.00  0.00              
ATOM     45  N   GLU    30       9.483  42.632  55.937  1.00  0.00              
ATOM     46  CA  GLU    30       8.329  42.100  56.643  1.00  0.00              
ATOM     47  C   GLU    30       8.505  40.634  56.945  1.00  0.00              
ATOM     48  O   GLU    30       7.606  40.040  57.523  1.00  0.00              
ATOM     49  N   SER    31       9.614  40.007  56.588  1.00  0.00              
ATOM     50  CA  SER    31       9.766  38.588  56.879  1.00  0.00              
ATOM     51  C   SER    31      10.613  38.238  58.098  1.00  0.00              
ATOM     52  O   SER    31      10.424  37.172  58.698  1.00  0.00              
ATOM     53  N   HIS    32      11.522  39.123  58.514  1.00  0.00              
ATOM     54  CA  HIS    32      12.450  38.799  59.587  1.00  0.00              
ATOM     55  C   HIS    32      12.457  39.881  60.599  1.00  0.00              
ATOM     56  O   HIS    32      12.282  41.039  60.223  1.00  0.00              
ATOM     57  N   ILE    33      12.681  39.487  61.864  1.00  0.00              
ATOM     58  CA  ILE    33      12.798  40.423  62.977  1.00  0.00              
ATOM     59  C   ILE    33      14.116  40.186  63.679  1.00  0.00              
ATOM     60  O   ILE    33      14.503  39.041  63.824  1.00  0.00              
ATOM     61  N   LEU    34      14.851  41.185  64.102  1.00  0.00              
ATOM     62  CA  LEU    34      16.117  40.972  64.738  1.00  0.00              
ATOM     63  C   LEU    34      15.899  40.898  66.271  1.00  0.00              
ATOM     64  O   LEU    34      15.127  41.653  66.869  1.00  0.00              
ATOM     65  N   THR    35      16.543  39.925  66.915  1.00  0.00              
ATOM     66  CA  THR    35      16.589  39.801  68.362  1.00  0.00              
ATOM     67  C   THR    35      17.464  40.950  68.828  1.00  0.00              
ATOM     68  O   THR    35      18.633  41.063  68.421  1.00  0.00              
ATOM     69  N   VAL    36      16.957  41.882  69.629  1.00  0.00              
ATOM     70  CA  VAL    36      17.830  42.959  70.075  1.00  0.00              
ATOM     71  C   VAL    36      18.329  42.600  71.457  1.00  0.00              
ATOM     72  O   VAL    36      17.616  42.297  72.428  1.00  0.00              
ATOM     73  N   SER    37      19.619  42.357  71.485  1.00  0.00              
ATOM     74  CA  SER    37      20.259  41.994  72.738  1.00  0.00              
ATOM     75  C   SER    37      20.355  43.178  73.725  1.00  0.00              
ATOM     76  O   SER    37      20.320  44.345  73.334  1.00  0.00              
ATOM     77  N   SER    38      20.431  42.926  75.035  1.00  0.00              
ATOM     78  CA  SER    38      20.748  43.924  76.065  1.00  0.00              
ATOM     79  C   SER    38      22.251  43.895  76.224  1.00  0.00              
ATOM     80  O   SER    38      22.861  42.838  76.059  1.00  0.00              
ATOM     81  N   PHE    39      22.871  45.009  76.516  1.00  0.00              
ATOM     82  CA  PHE    39      24.281  45.063  76.729  1.00  0.00              
ATOM     83  C   PHE    39      24.515  46.226  77.647  1.00  0.00              
ATOM     84  O   PHE    39      23.700  47.146  77.735  1.00  0.00              
ATOM     85  N   TYR    40      25.581  46.134  78.407  1.00  0.00              
ATOM     86  CA  TYR    40      25.975  47.197  79.302  1.00  0.00              
ATOM     87  C   TYR    40      27.069  48.006  78.629  1.00  0.00              
ATOM     88  O   TYR    40      27.542  49.002  79.196  1.00  0.00              
ATOM     89  N   ARG    41      27.571  47.674  77.449  1.00  0.00              
ATOM     90  CA  ARG    41      28.575  48.557  76.911  1.00  0.00              
ATOM     91  C   ARG    41      27.939  49.870  76.470  1.00  0.00              
ATOM     92  O   ARG    41      26.709  50.051  76.355  1.00  0.00              
ATOM     93  N   THR    42      28.849  50.804  76.225  1.00  0.00              
ATOM     94  CA  THR    42      28.534  52.144  75.729  1.00  0.00              
ATOM     95  C   THR    42      28.181  52.082  74.232  1.00  0.00              
ATOM     96  O   THR    42      28.813  51.331  73.479  1.00  0.00              
ATOM     97  N   PRO    43      27.115  52.789  73.812  1.00  0.00              
ATOM     98  CA  PRO    43      26.681  52.927  72.430  1.00  0.00              
ATOM     99  C   PRO    43      27.779  53.510  71.543  1.00  0.00              
ATOM    100  O   PRO    43      28.617  54.300  71.985  1.00  0.00              
ATOM    101  N   PRO    44      27.741  53.169  70.270  1.00  0.00              
ATOM    102  CA  PRO    44      28.674  53.707  69.321  1.00  0.00              
ATOM    103  C   PRO    44      27.793  54.563  68.412  1.00  0.00              
ATOM    104  O   PRO    44      26.557  54.473  68.366  1.00  0.00              
ATOM    105  N   LEU    45      28.478  55.463  67.707  1.00  0.00              
ATOM    106  CA  LEU    45      27.867  56.377  66.763  1.00  0.00              
ATOM    107  C   LEU    45      27.201  55.528  65.710  1.00  0.00              
ATOM    108  O   LEU    45      27.786  54.603  65.156  1.00  0.00              
ATOM    109  N   GLY    46      25.924  55.777  65.540  1.00  0.00              
ATOM    110  CA  GLY    46      25.173  55.048  64.534  1.00  0.00              
ATOM    111  C   GLY    46      24.246  54.040  65.177  1.00  0.00              
ATOM    112  O   GLY    46      23.270  53.621  64.560  1.00  0.00              
ATOM    113  N   PRO    47      24.446  53.644  66.425  1.00  0.00              
ATOM    114  CA  PRO    47      23.602  52.641  67.044  1.00  0.00              
ATOM    115  C   PRO    47      22.353  53.238  67.659  1.00  0.00              
ATOM    116  O   PRO    47      22.437  54.259  68.328  1.00  0.00              
ATOM    117  N   GLN    48      21.172  52.684  67.432  1.00  0.00              
ATOM    118  CA  GLN    48      19.934  53.149  68.021  1.00  0.00              
ATOM    119  C   GLN    48      19.546  52.198  69.128  1.00  0.00              
ATOM    120  O   GLN    48      19.454  50.982  68.935  1.00  0.00              
ATOM    121  N   ASP    49      19.321  52.777  70.287  1.00  0.00              
ATOM    122  CA  ASP    49      18.908  52.047  71.450  1.00  0.00              
ATOM    123  C   ASP    49      17.570  51.493  71.073  1.00  0.00              
ATOM    124  O   ASP    49      16.784  52.215  70.470  1.00  0.00              
ATOM    125  N   GLN    50      17.282  50.234  71.341  1.00  0.00              
ATOM    126  CA  GLN    50      16.052  49.640  70.895  1.00  0.00              
ATOM    127  C   GLN    50      16.129  49.049  69.501  1.00  0.00              
ATOM    128  O   GLN    50      15.244  48.275  69.136  1.00  0.00              
ATOM    129  N   PRO    51      17.090  49.400  68.671  1.00  0.00              
ATOM    130  CA  PRO    51      17.248  48.747  67.383  1.00  0.00              
ATOM    131  C   PRO    51      18.516  47.887  67.363  1.00  0.00              
ATOM    132  O   PRO    51      18.487  46.695  67.105  1.00  0.00              
ATOM    133  N   ASP    52      19.686  48.425  67.609  1.00  0.00              
ATOM    134  CA  ASP    52      20.872  47.598  67.538  1.00  0.00              
ATOM    135  C   ASP    52      21.072  46.710  68.773  1.00  0.00              
ATOM    136  O   ASP    52      21.502  45.548  68.693  1.00  0.00              
ATOM    137  N   TYR    53      20.785  47.348  69.908  1.00  0.00              
ATOM    138  CA  TYR    53      20.904  46.860  71.279  1.00  0.00              
ATOM    139  C   TYR    53      19.947  47.639  72.164  1.00  0.00              
ATOM    140  O   TYR    53      19.478  48.730  71.791  1.00  0.00              
ATOM    141  N   LEU    54      19.600  47.063  73.308  1.00  0.00              
ATOM    142  CA  LEU    54      18.919  47.785  74.378  1.00  0.00              
ATOM    143  C   LEU    54      20.060  48.001  75.329  1.00  0.00              
ATOM    144  O   LEU    54      20.599  47.021  75.849  1.00  0.00              
ATOM    145  N   ASN    55      20.489  49.237  75.485  1.00  0.00              
ATOM    146  CA  ASN    55      21.627  49.592  76.336  1.00  0.00              
ATOM    147  C   ASN    55      21.083  49.849  77.758  1.00  0.00              
ATOM    148  O   ASN    55      20.189  50.682  77.970  1.00  0.00              
ATOM    149  N   ALA    56      21.517  49.018  78.704  1.00  0.00              
ATOM    150  CA  ALA    56      20.958  49.002  80.046  1.00  0.00              
ATOM    151  C   ALA    56      22.102  49.223  81.015  1.00  0.00              
ATOM    152  O   ALA    56      23.268  48.994  80.695  1.00  0.00              
ATOM    153  N   ALA    57      21.825  49.676  82.216  1.00  0.00              
ATOM    154  CA  ALA    57      22.861  49.782  83.210  1.00  0.00              
ATOM    155  C   ALA    57      23.320  48.409  83.687  1.00  0.00              
ATOM    156  O   ALA    57      22.642  47.403  83.508  1.00  0.00              
ATOM    157  N   VAL    58      24.432  48.328  84.439  1.00  0.00              
ATOM    158  CA  VAL    58      24.845  47.091  85.112  1.00  0.00              
ATOM    159  C   VAL    58      23.827  46.652  86.172  1.00  0.00              
ATOM    160  O   VAL    58      23.540  45.460  86.275  1.00  0.00              
ATOM    161  N   ALA    59      23.207  47.559  86.929  1.00  0.00              
ATOM    162  CA  ALA    59      22.194  47.153  87.891  1.00  0.00              
ATOM    163  C   ALA    59      20.968  46.571  87.194  1.00  0.00              
ATOM    164  O   ALA    59      20.393  45.573  87.654  1.00  0.00              
ATOM    165  N   LEU    60      20.518  47.136  86.070  1.00  0.00              
ATOM    166  CA  LEU    60      19.448  46.462  85.349  1.00  0.00              
ATOM    167  C   LEU    60      19.889  45.103  84.780  1.00  0.00              
ATOM    168  O   LEU    60      19.129  44.119  84.918  1.00  0.00              
ATOM    169  N   GLU    61      21.091  44.966  84.183  1.00  0.00              
ATOM    170  CA  GLU    61      21.507  43.671  83.630  1.00  0.00              
ATOM    171  C   GLU    61      21.626  42.662  84.782  1.00  0.00              
ATOM    172  O   GLU    61      21.162  41.521  84.638  1.00  0.00              
ATOM    173  N   THR    62      22.129  43.024  85.968  1.00  0.00              
ATOM    174  CA  THR    62      22.123  42.073  87.055  1.00  0.00              
ATOM    175  C   THR    62      20.715  41.667  87.468  1.00  0.00              
ATOM    176  O   THR    62      20.467  40.474  87.750  1.00  0.00              
ATOM    177  N   SER    63      19.759  42.603  87.399  1.00  0.00              
ATOM    178  CA  SER    63      18.401  42.288  87.790  1.00  0.00              
ATOM    179  C   SER    63      17.807  41.331  86.790  1.00  0.00              
ATOM    180  O   SER    63      17.084  40.401  87.142  1.00  0.00              
ATOM    181  N   LEU    64      18.099  41.572  85.521  1.00  0.00              
ATOM    182  CA  LEU    64      17.675  40.670  84.455  1.00  0.00              
ATOM    183  C   LEU    64      18.237  39.260  84.643  1.00  0.00              
ATOM    184  O   LEU    64      17.542  38.281  84.380  1.00  0.00              
ATOM    185  N   ALA    65      19.491  39.077  85.023  1.00  0.00              
ATOM    186  CA  ALA    65      20.020  37.743  85.361  1.00  0.00              
ATOM    187  C   ALA    65      19.208  37.097  86.502  1.00  0.00              
ATOM    188  O   ALA    65      18.659  35.992  86.382  1.00  0.00              
ATOM    189  N   PRO    66      19.115  37.765  87.644  1.00  0.00              
ATOM    190  CA  PRO    66      18.397  37.209  88.778  1.00  0.00              
ATOM    191  C   PRO    66      16.926  36.914  88.511  1.00  0.00              
ATOM    192  O   PRO    66      16.354  36.005  89.120  1.00  0.00              
ATOM    193  N   GLU    67      16.283  37.653  87.594  1.00  0.00              
ATOM    194  CA  GLU    67      14.877  37.371  87.291  1.00  0.00              
ATOM    195  C   GLU    67      14.624  36.464  86.113  1.00  0.00              
ATOM    196  O   GLU    67      13.517  36.396  85.592  1.00  0.00              
ATOM    197  N   GLU    68      15.694  35.787  85.675  1.00  0.00              
ATOM    198  CA  GLU    68      15.674  34.843  84.568  1.00  0.00              
ATOM    199  C   GLU    68      15.110  35.416  83.259  1.00  0.00              
ATOM    200  O   GLU    68      14.325  34.807  82.538  1.00  0.00              
ATOM    201  N   LEU    69      15.534  36.600  82.839  1.00  0.00              
ATOM    202  CA  LEU    69      15.007  37.200  81.651  1.00  0.00              
ATOM    203  C   LEU    69      15.762  36.806  80.382  1.00  0.00              
ATOM    204  O   LEU    69      15.349  37.208  79.276  1.00  0.00              
ATOM    205  N   LEU    70      16.893  36.080  80.493  1.00  0.00              
ATOM    206  CA  LEU    70      17.721  35.771  79.327  1.00  0.00              
ATOM    207  C   LEU    70      17.513  34.367  78.875  1.00  0.00              
ATOM    208  O   LEU    70      17.289  33.472  79.704  1.00  0.00              
ATOM    209  N   ASN    71      17.572  34.206  77.552  1.00  0.00              
ATOM    210  CA  ASN    71      17.742  32.902  76.888  1.00  0.00              
ATOM    211  C   ASN    71      19.211  32.548  77.159  1.00  0.00              
ATOM    212  O   ASN    71      19.527  31.417  77.500  1.00  0.00              
END
