

PFRMAT ABF1
TARGET T0019
AUTHOR 6776-3217-5205 M STERNBERG, ICRF, m.sternberg@icrf.icnet.uk
REMARK PREDICTION OF REPA1 E.COLI
REMARK PREDICTION OF SECONDARY STRUCTRURE FROM ALIGNED
REMARK HOMOLOGOUS SEQUENCES USING THE PROGRAM DSC
REMARK (DISCRIMINATION OF SECONDARY STRUCTURE) 
REMARK DEVELOPED BY ROSS D KING & MICHAEL J E STERNBERG
REMARK AT THE BIOMOLECULAR MODELLING LABORATORY
REMARK IMPERIAL CANCER RESEARCH FUND
REMARK 44 LINCOLNS INN FIELDS, LONDON WC2A 3PX, UK
REMARK TEL +44-171-269-3565
REMARK FAX +44-171-269-3479
REMARK Predicted accuracy = 0.72 
BEGDAT 1.1 1 1.0
SS 340
M C 0.89
A C 0.88
E C 0.88
R C 0.88
Y C 0.67
I C 0.69
S C 0.70
Q C 0.55
R C 0.50
H C 0.50
W C 0.50
S C 0.55
Q C 0.55
L C 0.89
P C 0.89
P C 0.89
E C 0.69
E C 0.69
Q H 0.63
I H 0.69
R H 0.60
V H 0.69
W H 0.91
E H 0.89
D H 0.75
Y H 0.72
E H 0.52
A C 0.59
G C 0.79
R C 0.79
A C 0.59
T E 0.50
T E 0.49
F E 0.51
L E 0.51
V C 0.50
E C 0.69
P C 0.59
E H 0.52
R H 0.52
K H 0.52
R H 0.52
T H 0.52
K H 0.52
R H 0.52
R C 0.52
R C 0.52
G C 0.83
E C 0.85
H C 0.85
S C 0.82
T C 0.73
K C 0.73
P C 0.73
K C 0.73
C C 0.87
E C 0.87
N C 0.85
P C 0.89
T C 0.88
W C 0.67
Y C 0.79
R C 0.89
P C 0.59
A H 0.59
R H 0.52
Y H 0.52
K H 0.44
A H 0.44
L C 0.52
S C 0.58
G C 0.70
Q C 0.70
L C 0.70
G C 0.70
H H 0.52
R H 0.59
Y H 0.91
N H 0.91
R H 0.94
L H 0.94
V H 0.79
K H 0.52
K C 0.67
D C 0.88
P C 0.89
V C 0.79
T C 0.79
G C 0.69
E C 0.59
Q C 0.50
S E 0.50
L E 0.51
R E 0.77
M E 0.68
H E 0.59
M C 0.50
S C 0.70
R C 0.79
H C 0.88
P C 0.69
F C 0.58
Y C 0.50
V C 0.40
Q C 0.50
K C 0.40
R C 0.46
T C 0.55
F C 0.50
A C 0.59
G C 0.69
R C 0.50
K C 0.50
Y C 0.50
A C 0.50
F C 0.50
R C 0.59
P H 0.72
E H 0.72
K H 0.72
Q H 0.72
R H 0.59
L H 0.59
L H 0.59
D H 0.52
A C 0.50
V C 0.58
W C 0.67
P E 0.42
V E 0.65
L E 0.89
V E 0.89
S E 0.47
F C 0.68
S C 0.67
D C 0.79
A C 0.89
G C 0.89
T C 0.82
H C 0.67
T E 0.47
V E 0.51
G E 0.51
M E 0.42
S H 0.44
V H 0.74
S H 0.75
R H 0.91
L H 0.91
A H 0.91
K H 0.91
E H 0.62
I C 0.52
S C 0.82
P C 0.88
K C 0.89
D C 0.89
S C 0.88
K C 0.89
G C 0.83
K C 0.62
V C 0.47
I C 0.62
P C 0.54
E C 0.40
L C 0.75
E C 0.62
V C 0.50
T C 0.54
V H 0.66
S H 0.88
R H 0.88
L H 0.88
S H 0.88
R H 0.88
L H 0.88
L H 0.88
A H 0.88
E H 0.91
Q H 0.94
V H 0.62
R E 0.49
F E 0.56
G E 0.65
V E 0.65
L E 0.42
G C 0.68
M C 0.89
S C 0.79
E C 0.70
E C 0.70
T C 0.46
M H 0.48
W H 0.59
D H 0.59
R H 0.88
E H 0.72
T H 0.72
R H 0.52
Q H 0.52
R C 0.59
L C 0.79
P C 0.59
R C 0.50
Y E 0.50
V E 0.68
W E 0.65
I E 0.47
T C 0.69
P C 0.69
A C 0.69
G C 0.59
W C 0.50
Q C 0.50
M C 0.50
L C 0.50
G C 0.40
V C 0.50
D H 0.66
M H 0.94
V H 0.94
K H 0.91
L H 0.88
H H 0.88
E H 0.88
Q H 0.72
Q H 0.88
Q H 0.88
K H 0.88
R H 0.91
L H 0.94
R H 0.75
E H 0.94
S C 0.50
E C 0.50
I C 0.59
R H 0.52
Q H 0.94
Q H 0.94
L H 0.89
I H 0.91
R H 0.91
E H 0.91
G H 0.72
V H 0.63
L C 0.59
R C 0.59
E C 0.59
D H 0.52
E H 0.52
D H 0.63
I H 0.66
S H 0.62
V H 0.89
H H 0.91
A H 0.88
A H 0.88
R H 0.72
K H 0.63
R H 0.74
W H 0.42
Y H 0.51
L H 0.91
Q H 0.94
R H 0.88
S H 0.72
Q H 0.88
D H 0.88
A H 0.88
L H 0.88
K H 0.88
H H 0.88
R H 0.88
R H 0.88
A H 0.88
K H 0.88
A H 0.91
A H 0.88
A H 0.88
R H 0.88
K H 0.88
R H 0.88
A H 0.88
N H 0.88
L H 0.91
L H 0.91
K H 0.88
K C 0.69
L C 0.89
P C 0.89
A C 0.79
D C 0.69
Q H 0.52
Q H 0.75
I H 0.89
Y H 0.89
E H 0.94
M H 0.91
S H 0.94
Q H 0.94
H H 0.94
I H 0.94
L H 0.79
K C 0.55
R C 0.89
M C 0.89
P C 0.89
P C 0.89
D C 0.89
E C 0.70
A C 0.52
Y C 0.50
W C 0.44
C C 0.83
T C 0.89
P C 0.69
E H 0.52
R H 0.72
L H 0.88
Q H 0.88
Q H 0.94
L H 0.94
A H 0.89
I H 0.94
R H 0.91
E H 0.88
L H 0.88
Y H 0.88
Q H 0.94
L H 0.89
E H 0.42
L C 0.50
T C 0.57
L C 0.87
A C 0.87
A C 0.82
P C 0.82
P C 0.88
P C 0.89
H C 0.89
ENDDAT 1.1
END
