
PFRMAT ABF1
TARGET T0014
AUTHOR 2225-3577-7739 Munson, DiFrancesco,Vasudevan,McQueen,ABS,DCRT,NIH
REMARK QL "Quadratic Logistic Method
REMARK using profiles (homologs) and/or adjustment of a
REMARK prediction to align with REMARK chosen hidden markov model (HMM)
REMARK HMMs were developed as described in submission to
REMARK "fold-prediction" section
BEGDAT 1.1  3   .5
REMARK QL w/o profiles updated with HMM "tims.mod"
SS 252
M C 0.47
K E 0.41
T E 0.52
V E 0.59
T E 0.53
V E 0.55
K E 0.57
N E 0.68
L E 0.63
I E 0.78
I E 0.59
G C 0.52
E C 0.74
G C 0.88
M C 0.90
P C 0.66
K H 0.60
I E 0.47
I E 0.62
V E 0.63
S E 0.67
L E 0.42
M C 0.56
G C 0.68
R C 0.72
D C 0.59
I H 0.57
N C 0.46
S H 0.52
V H 0.62
K H 0.71
A H 0.85
E H 0.78
A H 0.87
L H 0.81
A H 0.72
Y H 0.76
R H 0.78
E H 0.70
A H 0.74
T H 0.64
F H 0.65
D H 0.72
I H 0.81
L H 0.71
E H 0.75
W H 0.82
R H 0.72
V H 0.75
D H 0.65
H H 0.57
F E 0.37
M H 0.35
D H 0.39
I C 0.44
A C 0.50
S C 0.56
T C 0.55
Q C 0.54
S C 0.50
V H 0.53
L H 0.58
T H 0.66
A H 0.68
A H 0.65
R H 0.55
V H 0.48
I E 0.47
R H 0.34
D C 0.57
A C 0.64
M C 0.80
P C 0.70
D C 0.77
I C 0.76
P C 0.51
L H 0.40
L E 0.43
F E 0.55
T E 0.45
F H 0.39
R H 0.40
S C 0.55
A C 0.49
K C 0.53
E C 0.69
G C 0.89
G C 0.87
E C 0.76
Q H 0.40
T E 0.52
I E 0.58
T E 0.52
T E 0.37
Q H 0.58
H H 0.62
Y H 0.60
L H 0.42
T E 0.50
L H 0.41
N H 0.53
R H 0.49
A C 0.44
A C 0.40
I C 0.41
D C 0.52
S C 0.57
G C 0.68
L C 0.36
V H 0.58
D H 0.50
M H 0.62
I H 0.45
D H 0.60
L H 0.57
E H 0.66
L H 0.52
F C 0.42
T C 0.71
G C 0.86
D C 0.80
A C 0.72
D C 0.61
V H 0.49
K H 0.51
A H 0.44
T H 0.47
V H 0.64
D H 0.49
Y H 0.60
A C 0.47
H C 0.47
A C 0.52
H C 0.63
N C 0.39
V E 0.55
Y E 0.83
V E 0.89
V E 0.89
M E 0.76
S E 0.51
N C 0.75
H C 0.80
D C 0.79
F C 0.83
H C 0.82
Q C 0.88
T C 0.95
P C 0.90
S C 0.78
A H 0.51
E H 0.76
E H 0.72
M H 0.81
V H 0.91
S H 0.86
R H 0.91
L H 0.92
R H 0.92
K H 0.93
M H 0.83
Q H 0.77
A H 0.66
L H 0.52
G C 0.54
A C 0.68
D C 0.79
I C 0.76
P C 0.60
K H 0.63
I H 0.57
A E 0.52
V E 0.46
M C 0.67
P C 0.72
Q C 0.72
S C 0.75
K C 0.61
H C 0.50
D C 0.44
V H 0.42
L H 0.53
T E 0.47
L H 0.49
L H 0.58
T H 0.62
A H 0.76
T H 0.80
L H 0.85
E H 0.86
M H 0.75
Q H 0.62
Q H 0.56
H C 0.46
Y C 0.54
A C 0.80
D C 0.86
R C 0.88
P C 0.62
V H 0.43
I E 0.54
T E 0.51
M H 0.51
S H 0.43
M H 0.48
A C 0.45
K H 0.61
E H 0.60
G C 0.45
V H 0.52
I H 0.47
S H 0.49
R H 0.53
L H 0.52
A H 0.52
G H 0.46
E H 0.49
V H 0.54
F H 0.61
G C 0.53
S C 0.49
A H 0.57
A H 0.61
T H 0.45
F H 0.49
G C 0.43
A H 0.39
V H 0.51
K H 0.48
Q H 0.55
A C 0.51
S C 0.81
A C 0.91
P C 0.67
G C 0.70
Q C 0.48
I E 0.38
A H 0.35
V H 0.52
N H 0.57
D H 0.56
L H 0.71
R H 0.79
S H 0.83
V H 0.78
L H 0.71
M H 0.62
I H 0.57
L H 0.68
H H 0.58
N H 0.47
A C 0.61
ENDDAT 1.1
END
