


# Checking ab initio prediction format ABF1

PFRMAT ABF1
TARGET T0005
AUTHOR 8221-6476-7341 Flohil, Institute of Applied Physics, flohil@cp.tn.tudelft.nl
REMARK Protein Secondary Structure Prediction Using Feedback of 
REMARK Structure Generation
# Reading ab initio prediction DAT 1.1  1

# Checking ab initio prediction format ABF1 DONE

# Submitted ab initio prediction data
# TARGET T0005 sequence:
# VQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWT
# VFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISTQSAI
# PYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDG
# FDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAG
# HLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSMKKTTMKIIPFNRL
# TIGEGQQHHLGGAKQAGDV
BEGDAT 1.1  1  1.00
SS 269
V C 
Q E 
I E 
H E 
D C 
I C 
T C 
G C 
K C 
D C 
C H 
Q H 
D H 
I H 
A H 
N H 
K H 
G C 
A C 
K C 
Q C 
S C 
G E 
L E 
Y E 
F E 
I E 
K E 
P E 
L C 
K C 
A C 
N C 
Q C 
Q C 
F E 
L E 
V E 
Y E 
C E 
E E 
I E 
D C 
G C 
S C 
G C 
N C 
G C 
W E 
T E 
V E 
F E 
Q E 
K E 
R C 
L C 
D C 
G C 
S C 
V C 
D H 
F H 
K H 
K H 
N H 
W H 
I H 
Q H 
Y H 
K H 
E H 
G H 
F C 
G C 
H C 
L C 
S C 
P C 
T C 
G C 
T C 
T E 
E E 
F E 
W E 
L E 
G E 
N C 
E C 
K C 
I C 
H E 
L E 
I E 
S E 
T C 
Q C 
S C 
A C 
I C 
P C 
Y E 
A E 
L E 
R E 
V E 
E E 
L E 
E E 
D C 
W C 
N C 
G C 
R C 
T E 
S E 
T E 
A E 
D E 
Y E 
A E 
M E 
F E 
K E 
V E 
G C 
P C 
E C 
A C 
D C 
K E 
Y E 
R E 
L E 
T E 
Y E 
A E 
Y E 
F C 
A C 
G C 
G C 
D C 
A H 
G H 
D H 
A H 
F H 
D H 
G H 
F C 
D C 
F C 
G C 
D C 
D C 
P C 
S C 
D C 
K C 
F E 
F E 
T E 
S E 
H E 
N C 
G C 
M C 
Q E 
F E 
S E 
T E 
W E 
D C 
N C 
D C 
N C 
D C 
K C 
F C 
E C 
G C 
N C 
C C 
A C 
E C 
Q C 
D C 
G C 
S C 
G C 
W C 
W H 
M H 
N H 
K H 
C H 
H C 
A C 
G C 
H C 
L C 
N C 
G C 
V E 
Y E 
Y E 
Q E 
G C 
G C 
T E 
Y E 
S E 
K E 
A C 
S C 
T C 
P C 
N C 
G C 
Y C 
D C 
N C 
G C 
I E 
I E 
W E 
A E 
T E 
W E 
K C 
T C 
R E 
W E 
Y E 
S E 
M E 
K C 
K C 
T E 
T E 
M E 
K E 
I E 
I E 
P E 
F E 
N C 
R C 
L C 
T C 
I C 
G C 
E C 
G C 
Q C 
Q C 
H C 
H C 
L C 
G C 
G C 
A C 
K C 
Q C 
A C 
G C 
D C 
V C 
ENDDAT 1.1
END
